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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122122744_122158239_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122122744 - 122158239

Intron Length:

35496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTATTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

GGACCCTTAAAG

Flanking Amino Acid:

PLRAHRGRYAGDKVIRVVPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.2

36.3

Major BPS

62.4

0.31

32.1

Major PPT

72.9

0.51

69.5

40.7

Minor 5ss

33.5

-1.9

3.1

36.8

40.4

Minor BPS

58.5

0.13

1.6

57.54

42.7

Associated Gene:

Gene:

CPA6

Ensembl Gene ID:

ENSAPLG00000002961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038468

122078399 - 122158388

79990

ENSAPLT00000003048

122078399 - 122158388

79990