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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122296936_122299246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122296936 - 122299246

Intron Length:

2311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TTGCTTGTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTTGCTTGTACC

Flanking Amino Acid:

LRVLVSTKPRETVKIPDSAD

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

72.5

39.9

Major BPS

84.8

0.86

85.7

34.9

Major PPT

72.6

0.51

66.3

44.1

Minor 5ss

43.2

-0.7

2.8

54.8

43.5

Minor BPS

53.4

0.09

1.9

71.13

40.4

Associated Gene:

Gene:

PREX2

Ensembl Gene ID:

ENSAPLG00000003294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036863

122210900 - 122384580

173681

ENSAPLT00000035484

122209928 - 122385035

175108

ENSAPLT00000003380

122243058 - 122384580

141523

ENSAPLT00000043503

122210276 - 122384580

174305