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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122324320_122325852_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122324320 - 122325852

Intron Length:

1533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATTA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTGCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TTAAACAGAAAA

Flanking Amino Acid:

KYFTPGRGLQEFQQEMEPKL

Intron Amino Acid Position:

1166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

80.2

28.1

Major BPS

71.4

0.53

67.3

39.3

Major PPT

71.9

0.49

0.9

68.3

37.5

Minor 5ss

40.9

-1

3.2

48.2

Minor BPS

43.8

-0.4

1.9

58.28

39.7

Associated Gene:

Gene:

PREX2

Ensembl Gene ID:

ENSAPLG00000003294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043503

122210276 - 122384580

174305

ENSAPLT00000036863

122210900 - 122384580

173681

ENSAPLT00000035484

122209928 - 122385035

175108

ENSAPLT00000003380

122243058 - 122384580

141523