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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122360427_122372606_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122360427 - 122372606

Intron Length:

12180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGGCAA

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATACTAT

U12 Branch Point Sequence:

CTGACCTCAGTT

Flanking Amino Acid:

HVIMCNSGVHRCTLSVTLEQ

Intron Amino Acid Position:

1502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

58.8

41.6

Major BPS

53.3

0.08

1.3

52.9

42.3

Major PPT

93.2

0.97

0.6

88.8

20.4

Minor 5ss

36.6

-1.5

3.3

47.2

48.2

Minor BPS

48.3

-0

1.8

64.84

45.8

Associated Gene:

Gene:

PREX2

Ensembl Gene ID:

ENSAPLG00000003294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036863

122210900 - 122384580

173681

ENSAPLT00000035484

122209928 - 122385035

175108

ENSAPLT00000003380

122243058 - 122384580

141523

ENSAPLT00000043503

122210276 - 122384580

174305