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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122377555_122384534_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122377555 - 122384534

Intron Length:

6980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TTTTTTTTGTCA

Flanking Amino Acid:

VRDRTPQSVPRLYKLCQPPP

Intron Amino Acid Position:

1559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

32.7

Major BPS

76.8

0.67

40.9

Major PPT

90.1

0.9

0.8

92.3

26.6

Minor 5ss

39.9

-1.1

3.3

57.8

46.8

Minor BPS

47.6

-0.1

3.4

77.15

33.9

Associated Gene:

Gene:

PREX2

Ensembl Gene ID:

ENSAPLG00000003294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003380

122243058 - 122384580

141523

ENSAPLT00000043503

122210276 - 122384580

174305

ENSAPLT00000036863

122210900 - 122384580

173681

ENSAPLT00000035484

122209928 - 122385035

175108