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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122458695_122479336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122458695 - 122479336

Intron Length:

20642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGCTTC

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTTTTTTAATG

Flanking Amino Acid:

ISPPSPESKSCIAISDELDK

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.1

75.2

35.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

92.9

0.97

0.7

92.3

26.6

Minor 5ss

0.1

2.7

72.5

37.4

Minor BPS

67.2

0.4

1.3

64.47

38.5

Associated Gene:

Gene:

C8orf34

Ensembl Gene ID:

ENSAPLG00000003546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003737

122420940 - 122604493

183554