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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122466324_122479336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122466324 - 122479336

Intron Length:

13013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTTTTTTAATG

Flanking Amino Acid:

LGKALENLSRSIAISDELDK

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.61

69.1

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

92.9

0.97

0.7

92.3

26.6

Minor 5ss

41.8

-0.9

2.8

54.8

43.5

Minor BPS

67.2

0.4

1.3

64.47

38.5

Associated Gene:

Gene:

C8orf34

Ensembl Gene ID:

ENSAPLG00000003546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046366

122401943 - 122591279

189337

ENSAPLT00000031805

122420084 - 122591279

171196

ENSAPLT00000003614

122420940 - 122604493

183554