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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122551123_122556360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122551123 - 122556360

Intron Length:

5238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTGGAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

TTTCTTCTACCT

Flanking Amino Acid:

TSEPAMSDSDAQVPGVETLT

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

81.9

26.3

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

61.6

0.26

1.1

56.9

42.3

Minor 5ss

36.6

-1.5

45.9

43.7

Minor BPS

0.11

1.9

77.41

39.2

Associated Gene:

Gene:

C8orf34

Ensembl Gene ID:

ENSAPLG00000003546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003614

122420940 - 122604493

183554

ENSAPLT00000046366

122401943 - 122591279

189337

ENSAPLT00000031805

122420084 - 122591279

171196

ENSAPLT00000003737

122420940 - 122604493

183554