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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122571661_122574651_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122571661 - 122574651

Intron Length:

2991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TATGTGTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTGTTTGTATGT

Flanking Amino Acid:

ELQTMEKHLADIEKDLALWE

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.2

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.38

1.1

60.7

44.5

Minor 5ss

45.6

-0.5

2.5

56.4

42.4

Minor BPS

43.6

-0.4

2.3

66.16

45.4

Associated Gene:

Gene:

C8orf34

Ensembl Gene ID:

ENSAPLG00000003546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046366

122401943 - 122591279

189337

ENSAPLT00000031805

122420084 - 122591279

171196

ENSAPLT00000003737

122420940 - 122604493

183554

ENSAPLT00000003614

122420940 - 122604493

183554