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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122575155_122579969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122575155 - 122579969

Intron Length:

4815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TTTATCTAAAAT

Flanking Amino Acid:

VTTQRSSLSEDEFLQQLQLT

Intron Amino Acid Position:

589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.4

26.9

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

71.6

0.49

1.1

68.6

Minor 5ss

45.6

-0.5

3.1

65.7

39.5

Minor BPS

60.8

0.42

1.8

81.61

39.7

Associated Gene:

Gene:

C8orf34

Ensembl Gene ID:

ENSAPLG00000003546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031805

122420084 - 122591279

171196

ENSAPLT00000003737

122420940 - 122604493

183554

ENSAPLT00000003614

122420940 - 122604493

183554

ENSAPLT00000046366

122401943 - 122591279

189337