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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122580064_122591152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122580064 - 122591152

Intron Length:

11089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGATTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCTTTTTGATT

Flanking Amino Acid:

SEGVEADQDKCL*

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.7

0.71

0.9

37.6

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

70.3

0.72

1.1

81.54

34.7

Associated Gene:

Gene:

C8orf34

Ensembl Gene ID:

ENSAPLG00000003546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046366

122401943 - 122591279

189337

ENSAPLT00000031805

122420084 - 122591279

171196