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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122580064_122604417_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122580064 - 122604417

Intron Length:

24354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ACTTCTTTGATC

Flanking Amino Acid:

SEGVEADQDKYIQLFTSPVH

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

0.85

0.9

39.9

Major PPT

90.3

0.91

0.7

88.4

28.7

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

69.7

0.6

1.1

71.13

34.7

Associated Gene:

Gene:

C8orf34

Ensembl Gene ID:

ENSAPLG00000003546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003737

122420940 - 122604493

183554

ENSAPLT00000003614

122420940 - 122604493

183554