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Intron Name: Anas_platyrhynchos_platyrhynchos_2_12287369_12287486_R

Intron Information:

Intron Rank:

131075

Intron Class:

major

Intron Phase:

Intron Coordinates:

12287369 - 12287486

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGGCAT

5'SS Class:

major

3'SS Sequence:

TATCTCTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TCTCACTGATAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

62.2

43.7

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

81.3

0.7

0.8

73.9

36.4

Minor 5ss

31.2

-2.2

3.6

43.2

45.5

Minor BPS

45.3

-0.2

1.9

65.07

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017726

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026371

12287067 - 12291060

3994