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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122996824_123000029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122996824 - 123000029

Intron Length:

3206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AGTTTTTCATGT

Flanking Amino Acid:

CINGGNHSTGVRNYTECACV

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

75.3

40.8

Major BPS

100

1.24

0.5

100

Major PPT

86.1

0.81

0.7

79.7

32.2

Minor 5ss

36.4

-1.5

2.9

43.6

43.3

Minor BPS

44.8

-0.3

62.54

41.9

Associated Gene:

Gene:

SLCO5A1

Ensembl Gene ID:

ENSAPLG00000004488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034820

122993028 - 123061457

68430

ENSAPLT00000004611

122986488 - 123061457

74970