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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123000190_123011386_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123000190 - 123011386

Intron Length:

11197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAGCAT

U12 Branch Point Sequence:

CTTGCCCTACTA

Flanking Amino Acid:

LGGINIPYTTGPTLAMAHRN

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

78.8

35.5

Major BPS

50.9

0.02

1.5

63.4

42.8

Major PPT

89.3

0.88

0.6

88.2

21.6

Minor 5ss

36.6

-1.5

2.6

39.1

38.9

Minor BPS

48.1

-0.1

63.3

43.7

Associated Gene:

Gene:

SLCO5A1

Ensembl Gene ID:

ENSAPLG00000004488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034820

122993028 - 123061457

68430

ENSAPLT00000004611

122986488 - 123061457

74970