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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123024532_123030111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123024532 - 123030111

Intron Length:

5580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTGGCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTGGCTTTCATT

Flanking Amino Acid:

DQSDPRFIGNWWSGFLLCAI

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.2

36.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

60.1

0.23

58.6

37.1

Minor 5ss

33.9

-1.8

3.7

46.6

43.5

Minor BPS

0.27

1.9

74.76

43.2

Associated Gene:

Gene:

SLCO5A1

Ensembl Gene ID:

ENSAPLG00000004488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034415

123014727 - 123061086

46360

ENSAPLT00000004611

122986488 - 123061457

74970

ENSAPLT00000034820

122993028 - 123061457

68430