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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123165234_123166940_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123165234 - 123166940

Intron Length:

1707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACTGGTT

5'SS Class:

major

3'SS Sequence:

TTTTGTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGTGGCTAAATT

Flanking Amino Acid:

AQQFPFPPNYGISQQPDPGF

Intron Amino Acid Position:

1306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.3

1.2

61.2

43.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.5

0.82

0.7

85.6

29.2

Minor 5ss

34.6

-1.7

55.4

48.8

Minor BPS

47.4

-0.1

2.1

66.49

44.7

Associated Gene:

Gene:

NCOA2

Ensembl Gene ID:

ENSAPLG00000007560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021362

123151892 - 123229981

78090

ENSAPLT00000007930

123160463 - 123229981

69519