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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123167182_123167735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123167182 - 123167735

Intron Length:

554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

GAGTTATTGATA

Flanking Amino Acid:

LSLRPGVPTQGPINAQMLAQ

Intron Amino Acid Position:

1226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

74.9

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

83.3

0.75

0.8

74.4

36.5

Minor 5ss

30.2

-2.3

3.3

38.5

46.8

Minor BPS

49.3

-0

1.6

56.24

36.7

Associated Gene:

Gene:

NCOA2

Ensembl Gene ID:

ENSAPLG00000007560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021362

123151892 - 123229981

78090

ENSAPLT00000007930

123160463 - 123229981

69519