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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123167814_123169850_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123167814 - 123169850

Intron Length:

2037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATCGC

5'SS Class:

major

3'SS Sequence:

TTAATCTCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

QLQHRLQAQQNRQPLINQIS

Intron Amino Acid Position:

1200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

60.6

44.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.7

0.6

0.8

74.7

35.9

Minor 5ss

32.8

-2

3.2

44.8

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

NCOA2

Ensembl Gene ID:

ENSAPLG00000007560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021362

123151892 - 123229981

78090

ENSAPLT00000007930

123160463 - 123229981

69519