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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123170130_123172086_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123170130 - 123172086

Intron Length:

1957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGTGG

5'SS Class:

major

3'SS Sequence:

TGTATTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCGTAT

U12 Branch Point Sequence:

TGTTCCTGTATT

Flanking Amino Acid:

ALGIPELVSQSQAVDPETFP

Intron Amino Acid Position:

1107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

56.4

43.2

Major BPS

54.1

0.1

1.4

42.7

Major PPT

0.74

0.9

77.4

36.8

Minor 5ss

41.6

-0.9

3.2

55.4

48.8

Minor BPS

62.7

0.48

1.8

81.84

39.3

Associated Gene:

Gene:

NCOA2

Ensembl Gene ID:

ENSAPLG00000007560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021362

123151892 - 123229981

78090

ENSAPLT00000007930

123160463 - 123229981

69519