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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123172253_123176185_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123172253 - 123176185

Intron Length:

3933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CATGTTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

AGCTGTTTACCA

Flanking Amino Acid:

IDQATFGGQNRQPFGSSPDD

Intron Amino Acid Position:

1051

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.3

1.07

0.7

84.4

33.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

77.8

0.62

0.9

71.8

37.8

Minor 5ss

36.9

-1.5

51.2

45.2

Minor BPS

47.6

-0.1

57.67

42.3

Associated Gene:

Gene:

NCOA2

Ensembl Gene ID:

ENSAPLG00000007560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021362

123151892 - 123229981

78090

ENSAPLT00000007930

123160463 - 123229981

69519