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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123176316_123176963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123176316 - 123176963

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTGATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATTAT

U12 Branch Point Sequence:

TTTTCCTTGATT

Flanking Amino Acid:

QMLPSQVMNMGPSELEMNIG

Intron Amino Acid Position:

1008

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.7

44.5

Major BPS

64.6

0.36

1.1

55.7

39.9

Major PPT

72.8

0.51

0.9

74.4

Minor 5ss

37.4

-1.4

42.1

44.4

Minor BPS

89.6

1.33

0.7

99.24

21.9

Associated Gene:

Gene:

NCOA2

Ensembl Gene ID:

ENSAPLG00000007560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021362

123151892 - 123229981

78090

ENSAPLT00000007930

123160463 - 123229981

69519