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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123179374_123183132_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123179374 - 123183132

Intron Length:

3759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTCCG

5'SS Class:

major

3'SS Sequence:

TCCTCCTGTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

ATTCTTGTAACT

Flanking Amino Acid:

QKPAMRISQSTFNNPRAGQL

Intron Amino Acid Position:

866

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

56.4

42.6

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

0.5

0.9

65.1

36.3

Minor 5ss

31.3

-2.1

2.8

39.4

39.6

Minor BPS

57.1

0.3

79.06

37.2

Associated Gene:

Gene:

NCOA2

Ensembl Gene ID:

ENSAPLG00000007560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021362

123151892 - 123229981

78090

ENSAPLT00000007930

123160463 - 123229981

69519