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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123183344_123191995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123183344 - 123191995

Intron Length:

8652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGCCAT

U12 Branch Point Sequence:

TTTTCTTTGCTT

Flanking Amino Acid:

EEISFEPNEQPGSELDNLEE

Intron Amino Acid Position:

796

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

47.8

-0.1

1.6

58.2

48.3

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

49.4

0.03

3.5

86.34

34.1

Associated Gene:

Gene:

NCOA2

Ensembl Gene ID:

ENSAPLG00000007560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021362

123151892 - 123229981

78090

ENSAPLT00000007930

123160463 - 123229981

69519