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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123193266_123195484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123193266 - 123195484

Intron Length:

2219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCTC

5'SS Class:

strong_major

3'SS Sequence:

CCTTGCCACATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TTTTAGCTAATG

Flanking Amino Acid:

QLVISLHMLHREQNVCGMNQ

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

78.1

36.6

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

63.7

0.31

0.9

57.7

32.3

Minor 5ss

38.8

-1.3

53.4

43.7

Minor BPS

46.8

-0.3

2.5

65.03

42.9

Associated Gene:

Gene:

NCOA2

Ensembl Gene ID:

ENSAPLG00000007560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007930

123160463 - 123229981

69519

ENSAPLT00000021362

123151892 - 123229981

78090