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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123199345_123200218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123199345 - 123200218

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGCC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

AATTACTAAAGT

Flanking Amino Acid:

QPNSFKEDGEDLQSCLICVA

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.6

37.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

75.5

0.57

1.1

79.7

37.4

Minor 5ss

39.5

-1.2

3.1

53.7

43.5

Minor BPS

49.9

0.08

2.1

72.63

43.8

Associated Gene:

Gene:

NCOA2

Ensembl Gene ID:

ENSAPLG00000007560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007930

123160463 - 123229981

69519

ENSAPLT00000021362

123151892 - 123229981

78090