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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1232253_1232468_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1232253 - 1232468

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTGCGTGAG

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAG

U12 Branch Point Sequence:

GATTGCTAAGCA

Flanking Amino Acid:

RTQRAIAELIRERLKGQEEE

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.3

59.5

41.6

Major BPS

55.4

0.13

1.6

63.6

42.5

Major PPT

89.1

0.88

0.6

84.4

23.4

Minor 5ss

26.9

-2.7

3.2

29.4

36.7

Minor BPS

46.4

-0.2

2.2

61.3

44.5

Associated Gene:

Gene:

CCDC12

Ensembl Gene ID:

ENSAPLG00000005482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005666

1231875 - 1250680

18806