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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1232546_1232721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1232546 - 1232721

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTGTTCTCACCC

Flanking Amino Acid:

LANLAPRKPDWDLKRDVAKK

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.7

31.8

Major BPS

0.87

0.8

85.6

Major PPT

76.9

0.6

0.7

68.8

31.6

Minor 5ss

-2.3

3.2

38.4

40.8

Minor BPS

56.1

0.17

1.9

69.88

41.9

Associated Gene:

Gene:

CCDC12

Ensembl Gene ID:

ENSAPLG00000005482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005666

1231875 - 1250680

18806