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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1232903_1234013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1232903 - 1234013

Intron Length:

1111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCATCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GTTCCCCCATCT

Flanking Amino Acid:

RKVPPAKPASVEDVVKEQLE

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

66.3

0.4

1.1

41.8

Major PPT

70.6

0.46

0.8

62.8

33.5

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

47.1

-0.1

2.1

71.99

Associated Gene:

Gene:

CCDC12

Ensembl Gene ID:

ENSAPLG00000005482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005666

1231875 - 1250680

18806