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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123400110_123400678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123400110 - 123400678

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TAACATTTAACT

Flanking Amino Acid:

LQYNVTIPATEEQSSETISL

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

81.4

30.7

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

82.7

0.74

0.7

81.2

30.9

Minor 5ss

43.3

-0.7

3.1

60.6

44.5

Minor BPS

64.3

0.53

1.5

77.03

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007094

123390770 - 123404097

13328

ENSAPLT00000035835

123390054 - 123403417

13364