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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1234094_1239390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1234094 - 1239390

Intron Length:

5297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATTATT

5'SS Class:

major

3'SS Sequence:

CCTTCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCACCCCTCACT

Flanking Amino Acid:

RDDEEETVRHKEIKLRNYDP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

86.5

28.6

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

77.2

0.61

0.7

68.9

31.5

Minor 5ss

43.4

-0.7

2.9

60.8

37.5

Minor BPS

46.8

-0.1

2.1

62.86

46.7

Associated Gene:

Gene:

CCDC12

Ensembl Gene ID:

ENSAPLG00000005482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005666

1231875 - 1250680

18806