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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123596_128474_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
123596 - 128474

Intron Length:
4879

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTGGGTGTG

5'SS Class:
major

3'SS Sequence:
TCTTTCTCTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATGTGAC

U12 Branch Point Sequence:
ACTCCCTGACCC

Flanking Amino Acid:
DELRWTSRKFGLWSLSYEQE

Intron Amino Acid Position:
106

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.9
0.56
1
64.9
41.1

Major BPS
62.5
0.31
1.2
54.8
42.1

Major PPT
89.4
0.89
0.6
84.8
22.8

Minor 5ss
29.6
-2.3
3.4
35.9
42.5

Minor BPS
52
0.04
1.8
63.28
41.9

Associated Gene:

Gene:
ASB10

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

123092 - 132051
8960