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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123604164_123604479_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123604164 - 123604479

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTCTGTTCCACA

Flanking Amino Acid:

ALKALTLIHSRTNCVNILVT

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.9

30.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

80.9

0.7

0.8

75.8

32.8

Minor 5ss

33.9

-1.8

2.8

41.5

45.1

Minor BPS

45.3

-0.3

2.3

62.68

44.2

Associated Gene:

Gene:

EYA1

Ensembl Gene ID:

ENSAPLG00000006292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017282

123593835 - 123755448

161614

ENSAPLT00000006583

123593835 - 123682579

88745

ENSAPLT00000037753

123593835 - 123742623

148789

ENSAPLT00000031239

123593835 - 123755448

161614