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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123628906_123635003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123628906 - 123635003

Intron Length:

6098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ACTCTCTTAATT

Flanking Amino Acid:

TGSYANRYGRDPPTSVSLGL

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.6

34.4

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

72.1

0.5

1.1

76.2

37.8

Minor 5ss

36.8

-1.5

3.3

44.3

43.6

Minor BPS

71.8

0.76

1.2

79.24

37.1

Associated Gene:

Gene:

EYA1

Ensembl Gene ID:

ENSAPLG00000006292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031239

123593835 - 123755448

161614

ENSAPLT00000017282

123593835 - 123755448

161614

ENSAPLT00000006583

123593835 - 123682579

88745

ENSAPLT00000037753

123593835 - 123742623

148789