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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123635088_123636267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123635088 - 123636267

Intron Length:

1180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATATTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TCTCTTTTTACA

Flanking Amino Acid:

PSPPPDSDLERVFIWDLDET

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

82.9

29.9

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

91.5

0.93

0.6

86.8

Minor 5ss

55.6

0.19

2.5

75.5

40.6

Minor BPS

57.4

0.22

1.6

67.8

38.6

Associated Gene:

Gene:

EYA1

Ensembl Gene ID:

ENSAPLG00000006292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031239

123593835 - 123755448

161614

ENSAPLT00000017282

123593835 - 123755448

161614

ENSAPLT00000006583

123593835 - 123682579

88745

ENSAPLT00000037753

123593835 - 123742623

148789