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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123636411_123647938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123636411 - 123647938

Intron Length:

11528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTACA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTAATACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GTTTCTTTAATA

Flanking Amino Acid:

TSQAVTDPAAAEYSTIHSPS

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.6

29.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

81.9

0.72

0.9

77.4

34.7

Minor 5ss

36.1

-1.6

2.6

Minor BPS

82.1

83.91

29.8

Associated Gene:

Gene:

EYA1

Ensembl Gene ID:

ENSAPLG00000006292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031239

123593835 - 123755448

161614

ENSAPLT00000017282

123593835 - 123755448

161614

ENSAPLT00000006583

123593835 - 123682579

88745

ENSAPLT00000037753

123593835 - 123742623

148789