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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123655305_123659486_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123655305 - 123659486

Intron Length:

4182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CTAACTGATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

CTGTCACTAACT

Flanking Amino Acid:

PGQPYGIPSYGALWAGIKTE

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

74.6

0.61

1.4

34.5

Major PPT

61.6

0.26

58.8

41.8

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

57.3

0.31

77.96

Associated Gene:

Gene:

EYA1

Ensembl Gene ID:

ENSAPLG00000006292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031239

123593835 - 123755448

161614

ENSAPLT00000017282

123593835 - 123755448

161614

ENSAPLT00000006583

123593835 - 123682579

88745