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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123672785_123674588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123672785 - 123674588

Intron Length:

1804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

AATTTTCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TTGTTTGCAATT

Flanking Amino Acid:

NNSMTPNGTEGDMTLLSTAD

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

74.5

32.2

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

77.4

0.62

0.8

74.7

35.3

Minor 5ss

38.7

-1.3

49.2

47.3

Minor BPS

47.8

-0

2.1

70.83

41.3

Associated Gene:

Gene:

EYA1

Ensembl Gene ID:

ENSAPLG00000006292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017282

123593835 - 123755448

161614