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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123676201_123742519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123676201 - 123742519

Intron Length:

66319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

CCCTGGTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

CCCTGGTTTACA

Flanking Amino Acid:

EDPQGINGKSVQKSQTGSDV

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

74.5

0.55

0.9

66.8

38.2

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

40.9

-0.7

2.6

50.21

47.2

Associated Gene:

Gene:

EYA1

Ensembl Gene ID:

ENSAPLG00000006292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031239

123593835 - 123755448

161614

ENSAPLT00000017282

123593835 - 123755448

161614