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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123740150_123742519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

123740150 - 123742519

Intron Length:

2370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

ATCTCTCTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

GTTTCTTTGACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

74.1

0.6

66.7

39.9

Major PPT

0.45

0.9

70.2

35.8

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

79.5

0.91

82.52

30.9

Associated Gene:

Gene:

EYA1

Ensembl Gene ID:

ENSAPLG00000006292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037753

123593835 - 123742623

148789