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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123742624_123754934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123742624 - 123754934

Intron Length:

12311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTGCG

5'SS Class:

major

3'SS Sequence:

GTCTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

AATTAATTAATA

Flanking Amino Acid:

ARASTREAPRSVEGDCLNLT

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

63.5

41.4

Major BPS

0.82

0.8

24.9

Major PPT

80.2

0.68

0.8

72.8

37.5

Minor 5ss

34.3

-1.8

3.1

38.2

40.5

Minor BPS

58.6

0.27

1.7

69.73

35.7

Associated Gene:

Gene:

EYA1

Ensembl Gene ID:

ENSAPLG00000006292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031239

123593835 - 123755448

161614

ENSAPLT00000017282

123593835 - 123755448

161614