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Intron Name: Anas_platyrhynchos_platyrhynchos_2_123990682_123992095_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123990682 - 123992095

Intron Length:

1414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCGTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

GATCCTTGCACT

Flanking Amino Acid:

IFYEPLAILNAMVRHNRMEL

Intron Amino Acid Position:

694

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.8

34.4

Major BPS

60.7

0.27

65.3

28.1

Major PPT

81.1

0.7

0.8

76.5

32.1

Minor 5ss

44.3

-0.6

2.9

62.8

41.9

Minor BPS

48.7

-0

1.9

68.58

41.8

Associated Gene:

Gene:

TRPA1

Ensembl Gene ID:

ENSAPLG00000006056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006317

123978456 - 124017315

38860