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Intron Name: Anas_platyrhynchos_platyrhynchos_2_124014001_124016520_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

124014001 - 124016520

Intron Length:

2520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGGG

5'SS Class:

major

3'SS Sequence:

ATGTCCAAAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

ATGTCCAAAATA

Flanking Amino Acid:

ASVASQDVFKVISDGSACRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.3

43.1

Major BPS

62.6

0.31

59.1

37.6

Major PPT

54.7

0.11

49.7

37.8

Minor 5ss

25.6

-2.8

3.1

31.6

42.7

Minor BPS

0.06

1.9

66.5

40.3

Associated Gene:

Gene:

TRPA1

Ensembl Gene ID:

ENSAPLG00000006056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006317

123978456 - 124017315

38860