Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_124069930_124073793_R

Intron Information:

Intron Rank:

134281

Intron Class:

major

Intron Phase:

Intron Coordinates:

124069930 - 124073793

Intron Length:

3864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

GCTCCACTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TATCATTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

33.6

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

69.6

0.44

0.9

62.5

33.4

Minor 5ss

35.2

-1.7

2.9

41.4

39.1

Minor BPS

0.51

1.5

74.38

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045834

124068292 - 124074065

5774

ENSAPLT00000027565

124068292 - 124074065

5774