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Intron Name: Anas_platyrhynchos_platyrhynchos_2_124349166_124349994_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
124349166 - 124349994

Intron Length:
829

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTAATCTAT

5'SS Class:
major

3'SS Sequence:
TCTTTCTGAGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGCTAAT

U12 Branch Point Sequence:
TCTTTCTGAGCA

Flanking Amino Acid:
SSWSSDKEEAGYCVEFKTES

Intron Amino Acid Position:
170

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.3
0.5
1.1
67.7
40.1

Major BPS
70.5
0.51
1.1
69.7
35.5

Major PPT
76.2
0.59
1
73.9
35.4

Minor 5ss
45.1
-0.5
2.9
56.3
47.9

Minor BPS
59.6
0.3
1.7
71.77
40.4

Associated Gene:

Gene:
SBSPON

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

124348158 - 124357026
8869