Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_124433327_124433946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124433327 - 124433946

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

TTTTGTCGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

TTGCCTTTCAGG

Flanking Amino Acid:

MADKEAKKVPSVPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

68.6

36.4

Major BPS

63.7

0.34

1.6

39.9

Major PPT

78.7

0.64

0.9

77.9

36.6

Minor 5ss

32.8

-2

2.6

34.8

34.3

Minor BPS

47.1

-0.3

2.1

56.01

45.7

Associated Gene:

Gene:

RPL7

Ensembl Gene ID:

ENSAPLG00000005601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015730

124430168 - 124434452

4285