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Intron Name: Anas_platyrhynchos_platyrhynchos_2_124457770_124459662_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124457770 - 124459662

Intron Length:

1893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AATTCTATAACT

Flanking Amino Acid:

RLMYMVTFMKSILPFEAVVC

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

32.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

91.7

0.94

0.6

87.8

22.3

Minor 5ss

40.6

-1

3.1

57.9

46.2

Minor BPS

70.4

0.72

1.5

84.87

34.8

Associated Gene:

Gene:

RDH10

Ensembl Gene ID:

ENSAPLG00000005505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005699

124435482 - 124461487

26006