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Intron Name: Anas_platyrhynchos_platyrhynchos_2_124503162_124504000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124503162 - 124504000

Intron Length:

839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

ATTAATCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGGACCTTACCA

Flanking Amino Acid:

AMKVENGSLEKQVKHLGEKA

Intron Amino Acid Position:

668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.6

29.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.7

0.64

0.9

74.4

40.3

Minor 5ss

38.7

-1.3

2.7

47.6

34.4

Minor BPS

61.2

0.35

1.7

68.94

43.1

Associated Gene:

Gene:

STAU2

Ensembl Gene ID:

ENSAPLG00000005175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044400

124503068 - 124655898

152831

ENSAPLT00000025342

124503068 - 124651455

148388