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Intron Name: Anas_platyrhynchos_platyrhynchos_2_124563780_124582847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124563780 - 124582847

Intron Length:

19068

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TATTCTGTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TATTCTGTTATA

Flanking Amino Acid:

EYLARIQGFQVHYSDRQNGK

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

65.7

40.1

Major BPS

72.5

0.56

1.2

63.4

Major PPT

78.3

0.64

0.9

72.9

37.1

Minor 5ss

34.7

-1.7

3.5

45.4

49.7

Minor BPS

48.9

-0

2.2

67.71

39.6

Associated Gene:

Gene:

STAU2

Ensembl Gene ID:

ENSAPLG00000005175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044400

124503068 - 124655898

152831

ENSAPLT00000025342

124503068 - 124651455

148388

ENSAPLT00000005398

124555287 - 124651455

96169