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Intron Name: Anas_platyrhynchos_platyrhynchos_2_124596691_124600308_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124596691 - 124600308

Intron Length:

3618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAACC

5'SS Class:

strong_major

3'SS Sequence:

CTACCTGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

GTTTACTTATTT

Flanking Amino Acid:

STPLQDQTEKLGENKSWNGQ

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

77.7

30.1

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

75.8

0.58

0.9

72.6

37.3

Minor 5ss

29.3

-2.4

2.8

35.3

40.9

Minor BPS

63.8

0.51

1.8

81.9

39.5

Associated Gene:

Gene:

STAU2

Ensembl Gene ID:

ENSAPLG00000005175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044400

124503068 - 124655898

152831

ENSAPLT00000025342

124503068 - 124651455

148388

ENSAPLT00000005398

124555287 - 124651455

96169